CRISPR/Cas Tools

List of software platforms and bioinformatics tools built to facilitate the design of guide RNAs (gRNAs) for use with the CRISPR/Cas system.


 

Tool Name	External Link	Provider
Synthego Design Tool	Webserver	Synthego
CASTING	Webserver	Caagle
Benchling CRISPR gRNA Design	Webserver	Benchling
Breaking-Cas	Webserver	Spanish National Center for Biotechnology
Cas-OFFinder	Webserver Source code	Seoul National University
CRISPOR	Webserver Source code	University of California, Santa Cruz TEFOR
CCTop	Webserver	University of Heidelberg
CHOPCHOP	Webserver	Harvard University
CHOPCHOP v2	Webserver Source code	University of Bergen
COD	Webserver	Dayong Guo
CRISPR Configurator & Specificity Tool	Webserver Specificity Tool	Dharmacon, Inc.
CRISPR Design	Webserver	Zhang Lab, MIT
CRISPRdirect	Webserver	Database Center for Life Science (DBCLS)
CRISPR gRNA Design Tool	Webserver	DNA2.0
CRISPR LifePipe	Webserver	Life and Soft
CRISPRseek	Source code	Bioconductor
DESKGEN	Webserver	Desktop Genetics
Genedata Selector	Webserver	Genedata
Geneious CRISPR Site Finder	Geneious	Geneious
GT-Scan	Webserver	CSIRO & EMBL-ABR
Off-Spotter	Webserver Source code Remote batch submission	Thomas Jefferson University
sgRNA Designer	Webserver Source code	Broad Institute