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CRISPR/Cas Tools

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List of software platforms and bioinformatics tools built to facilitate the design of guide RNAs (gRNAs) for use with the CRISPR/Cas system.


 
Tool Name External Link Provider
Synthego Design Tool Webserver Synthego
CASTING Webserver Caagle
Benchling CRISPR gRNA Design Webserver Benchling
Breaking-Cas Webserver Spanish National Center for Biotechnology
Cas-OFFinder Webserver Source code Seoul National University
CRISPOR Webserver Source code University of California, Santa Cruz TEFOR
CCTop Webserver University of Heidelberg
CHOPCHOP Webserver Harvard University
CHOPCHOP v2 Webserver Source code University of Bergen
COD Webserver Dayong Guo
CRISPR Configurator & Specificity Tool Webserver Specificity Tool Dharmacon, Inc.
CRISPR Design Webserver Zhang Lab, MIT
CRISPRdirect Webserver Database Center for Life Science (DBCLS)
CRISPR gRNA Design Tool Webserver DNA2.0
CRISPR LifePipe Webserver Life and Soft
CRISPRseek Source code Bioconductor
DESKGEN Webserver Desktop Genetics
Genedata Selector Webserver Genedata
Geneious CRISPR Site Finder Geneious Geneious
GT-Scan Webserver CSIRO & EMBL-ABR
Off-Spotter Webserver Source code Remote batch submission Thomas Jefferson University
sgRNA Designer Webserver Source code Broad Institute

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