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CHEMINFO : Useful tools for students and teachers

You may be interested in trying following webtools. Virtual combinatorial liabrary Electronic laboratory notebook (ELN) Mass spectroscopy NMR spectroscopy General chemistry Organic chemistry Biooriented chemistry This platform has been designed as a complement for teaching the class of biooriented chemistry. During this teaching the following topics are covered: Structural Analysis Mass spectrometry: monoisotopic mass and isotopic distribution Infrared dspectroscopy Degree of unsaturation Diastereotopic protons Nuclear magnetic resonance (NMR) Peptide synthesis Protected amino acids PDB : Protein database and a work on JSMol Structural analysis (NMR. IR MS) You will find on this website various tools allowing to learn and discover structural analysis. Those tools include; prediction experimental spectra exercises The following spectroscopy analysis are covered: infrared spectroscopy (IR) nuclear magnetic resonance (NMR) ma...

Easy LAMP Server Installation

The LAMP server (Linux, Apache, MySQL, PHP (or Perl) is one of the most important servers you might ever set up. Install all in single command. Open linux terminal and run the following command: sudo apt-get update sudo apt-get install lamp-server^ It’s important to remember the caret ( ^ ) at the end of the command. WARNING! The use of ^ in the package name suggests that this is a ‘meta-package’. Meaning a number of programs that are usually installed together. If you try to remove this ‘meta-package’ you could remove a lot of programs you are not expecting to… SSH being one of them! So please do install your lamp server using these instructions, but do not remove it using lamp-server^ What is LAMP Server? LAMP Server is a collection of open source software used to create a web server. The collection consists of: Linux – the operating system Apache server – the server MySQL – the database system PHP – the programming language After completion of installati...

WeNMR suite for Structural Biology

EOSC-hub (European Open Science Cloud - hub) brings together multiple service providers to create the Hub: a single contact point for European researchers and innovators to discover, access, use and reuse a broad spectrum of resources for advanced data-driven research. For researchers, this will mean a broader access to services supporting their scientific discovery and collaboration across disciplinary and geographical boundaries. The project mobilises providers from the EGI Federation, EUDAT CDI, INDIGO-DataCloud and other major European research infrastructures to deliver a common catalogue of research data, services and software for research.  EOSC-hub collaborates closely with GÉANT and the EOSCpilot and OpenAIRE-Advance projects to deliver a consistent service offer for research communities across Europe. EOSC-hub is funded by the European Union’s Horizon 2020 research and innovation programme under grant agreement 777536. The generous EU funding r...

CRISPR/Cas Tools

List of software platforms and bioinformatics tools built to facilitate the design of guide RNAs (gRNAs) for use with the CRISPR/Cas system.   Tool Name External Link Provider Synthego Design Tool Webserver Synthego CASTING Webserver Caagle Benchling CRISPR gRNA Design Webserver Benchling Breaking-Cas Webserver Spanish National Center for Biotechnology Cas-OFFinder Webserver Source code Seoul National University CRISPOR Webserver Source code University of California, Santa Cruz TEFOR CCTop Webserver University of Heidelberg CHOPCHOP Webserver Harvard University CHOPCHOP v2 Webserver Source code University of Bergen COD Webserver Dayong Guo CRISPR Configurator & Specificity Tool Webserver Specificity Tool Dharmacon, Inc. CRISPR Design Webserver Zhang Lab, MIT CRISPRdirect Web...

OMM: The Online Macromolecular Museum

The Online Macromolecular Museum (OMM) is a site for the display and study of macromolecules. Macromolecular structures, as discovered by crystallographic or NMR methods, are scientific objects in much the same sense as fossil bones or dried specimens: they can be archived, studied, and displayed in aesthetically pleasing, educational exhibits. Hence, a museum seems an appropriate designation for the collection of displays that are assembling. The OMM's exhibits are interactive tutorials on individual molecules in which hypertextual explanations of important biochemical features are linked to illustrative renderings of the molecule at hand. Please check the link in the image below to redirect to the main website.

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PhD Vacancy Bioinformatics

PhD Vacancy Chemoinformatics